Figure 5
From: Adaptable probabilistic mapping of short reads using position specific scoring matrices
Mapping simulated E. coli reads to the human genome. The fraction of all E. coli reads that are mapped is shown as a function of the read length. For each length, 100,000 Illumina reads were simulated using ART [43]. The dotted lines represent the fraction of unfiltered reads, while the full lines are the fraction of quality filtered reads. For Bowtie and GEM curves are only shown for unfiltered reads. The curves for BWA-MEM are hardly visible as BWA-MEM does not map any reads.