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Table 5 Overlap rate of true CNV segments and detected CNV segments in simulation study 3, comparing between m-HMM with and without change point adjustment

From: Copy number variation detection using next generation sequencing read counts

Overlap rate CNV segment length
1 kb 5 kb 10 kb
m-HMM without adj. 0.724 0.912 0.902
m-HMM 0.859 0.971 0.927
  1. The overlap rate is evaluated using the overlap length divided by the true CNV segment length.