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Figure 1 | BMC Bioinformatics

Figure 1

From: Structural genomics analysis of uncharacterized protein families overrepresented in human gut bacteria identifies a novel glycoside hydrolase

Figure 1

A ribbon diagram of the BT_1012 (3KZS) structure, active site and homologs of DUF4038. Panel A. The ribbon diagram of the BT_1012 (3KZS) structure, with alpha helixes shown in light blue, beta-sheet in purple. N-terminal is identified as a dark blue helix, C-terminal end as a red coil. N-terminal domain covers residues 27–370, C-terminal domain, 371–483. Panel B. Superimposition of the N-terminal domain of the BT_1012 (3KZS) structure, corresponding to the DUF4038 domain (green) and the family GH5 endo-beta-mannanase from Lycopersicon esculentum (tomato) (PDB 1RH9) (blue), active sites residues colored as red and purple, respectively. Panel C. Phylogenetic tree based on FFAS alignment of DUF4038 homologs from different glycoside families.

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BMC Bioinformatics

ISSN: 1471-2105

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