Table 2 Comparison of bootstrap 95% percentile confidence interval of average F-measure of different versions of HFold when given SimFold structure as input vs. when given HotKnots hotspots structures as input
From: A fast and robust iterative algorithm for prediction of RNA pseudoknotted secondary structures
Input | Hotspots | SimFold (MFE) | ||||
|---|---|---|---|---|---|---|
| Â | PKonly | HFold | Iter. HFold | PKonly | HFold | Iter. HFold |
HK-PK | (55.54, 71.06) | (73.35, 83.53) | (72.83, 83.37) | (50.57, 63.53) | (50.69, 63.54) | (51.42, 64.39) |
HK-PK-free | (31.37, 38.52) | (75.53, 80.79) | (74.93, 80.26) | (78.42, 83.21) | (78.33, 83.27) | (78.31, 83.17) |