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Table 3 Comparison of NextClip and Skewer in processing Nextera long mate-pair (LMP) reads (ERA264981)

From: Skewer: a fast and accurate adapter trimmer for next-generation sequencing paired-end reads

Reads for scaffolding Time for trimming adapters from Nextera LMP library (s) Assembly
   Pieces N50 length Total length (Mbp)
None N/A 14097 19150 105.80
Paired end (PE) only N/A 11781 23496 104.84
PE and NextClip processed 1480.39 6080 309342 111.55
PE and Skewer processed 993.49 (single thread) 5806 312317 112.52
  155.96 (8 threads)