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Figure 3 | BMC Bioinformatics

Figure 3

From: CIRCUS: a package for Circos display of structural genome variations from paired-end and mate-pair sequencing data

Figure 3

Display of both INS_FRAGMT and INV_INS_FRAGMT links predicted by SVDetect and NM links. NM, INS_FRAGMT and INV_INS_FRAGMT links are colored in red, green and blue color gradients, respectively, with gradation according to the number of reads supporting the link. CNV is displayed in a heatmap style with color according to the CNV value computed by FREEC. Coverage is displayed in dark grey histogram style. Grey and dark green boxes correspond to the Watson and Crick gene annotations, respectively. ec and NM are the labels for the chromosome under study and the no-match pseudo-chromosome.

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BMC Bioinformatics

ISSN: 1471-2105

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