Table 3 Selected complexes detected by ProRank + when tested on human protein-protein interaction dataset

CCT micro-complex

{CCT3, CCT2, CCT8, CCT6A, CCT4, CCT7, CCT5, TCP1}

100%

Ribosomal protein complex

{RPL32, RPS17, RPSA, RPL10A, RPL12, SLC25A5, RPL7, RPL18, RPL15, RPL21, RPS6, RPS4X, RPL19, RPL14, RPL4, RPS27L, RPS23, RPS26, RPS16, RPL7A, RPS24, RPS13, RPS15A, RPS8, RPS3A, FAU, RPL11, RPL6, RPL9, RPL5, RPS27, RPL17, RPS2, RPS25, RPS20, NOP56, RPS15, RPL23A, RPS10, RPL10L, RPLP0P6, RPS28, RPS5, RPS9, RPL23, RPL18A, RPS3, RPL37A, RPL31, RPL10, RPL8, RPS11, RPL36, RPS19, RPL30, RPL24, RPS21, RPL27, RPS12, RPL29, RPS29, RPS7, RPL22, RPLP0, RPS14, RPL3, RPLP2, RPL27A, RPL13, RPS18, RPS27A}

81.48%

PA700-20S-PA28 complex

{PSMD8, PSMB2, PSMC3, PSMC4, PSMA4, PSMA1, PSMD1, PSMD7, PSMA2, PSMB6, PSMB7, PSMD3, PSMB1, PSMC1, PSMC5, PSMC2, PSMB4, PSMA6, PSMD6, PSMD14, PSMD12, PSMD11, PSMD13, PSMA7, PSMC6, PSMA5, PSMB3, PSMB5, PSMA8, PSMD2}

83.33%

SWItch/Sucrose NonFermentable (SWI/SNF) complex

{SMARCA4, SMARCC1, ARID1A, SMARCE1, SMARCC2, SMARCA2, SMARCB1}

60%