All tools. Here we show the various analyses Osiris in Galaxy is capable of. Different tools depicted in this figure can be combined to create complex phylogenetic workflows starting with a wide range of input files. Tools for which we created wrappers as part of this publication are in italics, while existing tools already available in Galaxy are denoted with an asterisk. Each box depicts an analysis category or different stage in a potential workflow. Lines connecting the boxes show different ways these tools can be combined based on input and output formats.