Skip to main content

Table 5 Analysis on paths for ES, WI38, AG04550, and HPF cell types

From: Study of cell differentiation by phylogenetic analysis using histone modification data

H3K4me3 (row no.)

ES (D0)

WI38

AG04550

HPF

Total

1

0

0

0

1

2946

2

0

0

1

0

1050

3

0

0

1

1

1106

4

0

1

0

0

1670

5

0

1

0

1

382

6

0

1

1

0

879

7

0

1

1

1

4644

8

1

0

0

0

5465

9

1

0

0

1

354

10

1

0

1

0

353

11

1

0

1

1

989

12

1

1

0

0

62

13

1

1

0

1

35

14

1

1

1

0

506

15

1

1

1

1

21806

H3K27me3 (row no.)

ES (D0)

WI38

AG04550

HPF

Total

1

0

NA

1

NA

14734

2

1

NA

0

NA

20108

3

1

NA

1

NA

6342

  1. Table shows the number of different types of changes for ES (day 0), WI38, AG04550, HPF cell types. 1 and 0 represents the presence or absence of a peak as defined by the overlap representation in one region of the genome. The number of such 1-0 patterns are counted and presented in the last column. NA - not applicable (because data for the cell-type is not available).