Table 1 Data sources and performance of cross-species prediction
Species | Data source | Number of transcripts | Accuracy of CNCI | Accuracy of PLEK |
|---|---|---|---|---|
Mus musculus | RefSeq mRNA | 26062 | 93.9% | 88.1% |
Ensembl ncRNA | 2963 | 97.1% | 89.9% | |
Danio rerio | RefSeq mRNA | 14493 | 95.3% | 91.3% |
Ensembl ncRNA | 419 | 89.3% | 90.9% | |
Xenopus tropicalis | RefSeq mRNA | 8874 | 92.9% | 94.5% |
Ensembl ncRNA | 279* | 99.7% | 100.0% | |
Bos taurus | RefSeq mRNA | 13190 | 94.3% | 94.8% |
Ensembl ncRNA | 182 | 100.0% | 99.5% | |
Pan troglodytes | RefSeq mRNA | 1906 | 90.2% | 87.1% |
Ensembl ncRNA | 1166 | 100.0% | 99.9% | |
Sus scrofa | RefSeq mRNA | 3978 | 93.4% | 85.1% |
Ensembl ncRNA | 241 | 95.9% | 98.3% | |
Macaca mulatta | RefSeq mRNA | 5709 | 92.0% | 85.0% |
Ensembl ncRNA | 359 | 99.7% | 100.0% | |
Gorilla gorilla | RefSeq mRNA | 33025 | 87.4% | 83.8% |
Ensembl ncRNA | 367 | 99.7% | 99.7% | |
Pongo abelii | RefSeq mRNA | 3401 | 93.4% | 98.0% |
Ensembl ncRNA | 392 | 99.8% | 100.0% |