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Table 1 Comparison of AUC (area under the curve), precision, and recall using different sources for the gene-associated phenotypes and phenotype vocabulary filters

From: A random set scoring model for prioritization of disease candidate genes using protein complexes and data-mining of GeneRIF, OMIM and PubMed records

 

OMIM

PubMed

GeneRIF

AUC

Precision

Recall

AUC

Precision

Recall

AUC

Precision

Recall

STY

0.90

0.52

0.48

0.87

0.40

0.43

0.82

0.40

0.32

MeSH

0.89

0.48

0.49

0.85

0.36

0.38

0.83

0.36

0.37

ICD9CM

0.81

0.31

0.38

0.75

0.31

0.28

0.71

0.35

0.19

GO

0.82

0.38

0.30

0.73

0.32

0.18

0.71

0.23

0.19

  1. AUC, area under the curve.