Table 1 Budding yeast microarray datasets

D01

GSE8799

2008

15

Two mitotic cell-cycles (w/t).

[28]

D02

GSE8799

2008

15

Two mitotic cell-cycles (mutated cyclins).

[28]

D03

E-MTAB-643*

2011

15

Response to an impulse of glucose.

[14]

D04

E-MTAB-643*

2011

15

Response to an impulse of ammonium.

[14]

D05

GSE54951

2014

6

Response of dal80Δ mutant yeast to oxidative stress induced by linoleic acid hydroperoxide.

-

D06

GSE25002

2014

9

Osmotic stress response and treatment of transformants expressing the C. albicans Nik1 gene.

-

D07

GSE36298

2013

6

Mutations of OPI1, INO2, and INO4 under carbon-limited growth conditions.

[29]

D08

GSE50728

2013

8

120-hour time-course during fermentation.

-

D09

GSE36599

2013

5

Stress adaptation and recovery.

[30]

D10

GSE47712

2013

6

Combinations of the yeast mediator complex’s tail subunits mutations.

[31]

D11

GSE21870

2013

4

Combinations of mutations in DNUP60 and DADA2.

-

D12

GSE38848

2013

6

Various strains under aerobic or anaerobic growth.

[32]

D13

GSE36954

2012

6

Response to mycotoxic type B trichothecenes.

[33]

D14

GSE33276

2012

6

Response to heat stress for three different strains.

-

D15

GSE40399

2012

7

Response to various perturbations (heat, myriocin treatment, and lipid supplement).

-

D16

GSE31176

2012

6

W/t, rlm1Δ, and swi3Δ cells with or without Congo Red exposure.

[34]

D17

GSE26923

2012

5

Varying levels of GCN5 F221A mutant expression.

[35]

D18

GSE30054

2012

31

CEN.PK122 oscillating for two hours.

-

D19

GSE30051

2012

32

CEN.PL113-7D oscillating for two hours.

[36]

D20

GSE30052

2012

49

CEN.PL113-7D oscillating for four hours.

[36]

D21

GSE32974

2012

15

About 5 hours of cell-cycle (w/t).

[37]

D22

GSE32974

2012

15

About 4 hours of cell-cycle (mutant lacking Cdk1 activity).

[37]

D23

GSE24888

2011

5

Untreated yeast versus yeasts treated with E. arvense herbs from the USE, China, Europe, or India.

-

D24

GSE19302

2011

6

Response to degron induction for w/t and nab2-td mutant.

[38]

D25

GSE33427

2011

5

Untreated w/t, and wt/t, yap1Δ, yap8Δ, and double mutant treated with AsV.

[39]

D26

GSE17716

2011

7

Effect of overexpression and deletion of MSS11 and FLO8.

[40]

D27

GSE31366

2011

4

Presence and absence of mutli-inhibitors for parental and tolerant strains.

-

D28

GSE26171

2011

4

Response to patulin and/or ascorbic acid.

[41]

D29

GSE22270

2011

4

PY1 and Met30 strains in room temperature or 35 C.

-

D30

GSE29273

2011

4

Time-series during yeast second fermentation.

-

D31

GSE29353

2011

5

Different haploid strains growing in low glucose medium.

[42]

D32

GSE21571

2011

8

Different combinations of mutations in HTZ1, SWR1, SWC2, and SWC5.

[43]

D33

GSE17364

2010

4

Untreated w/t and Slt2-deficient yeasts, or treated with sodium arsenate for two hours.

[44]

D34

GSE15352

2010

8

24-hour time-course of yeast grown under a low temperature (10 C).

[45]

D35

GSE15352

2010

8

24-hour time-course of yeast grown under a normal temperature (28 C).

[45]

D36

GSE15352

2010

8

24-hour time-course of yeast grown under a high temperature (37 C).

[45]

D37

GSE16799

2009

21

UC-V irradiation of w/t, mig3Δ, SNF1Δ, RAD23Δ, RAD4Δ, and snf1Δrad23Δ.

[46]

D38

GSE16346

2009

4

BY474 cells grown to mid-log under presence versus absence of L-carnitine and/or H₂O₂.

-

D39

GSE14227

2009

10

Two hours of wild-type yeast growth.

[47]

D40

GSE14227

2009

9

Two hours of sch9Δ mutant yeast growth.

[47]