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Table 3 Most enriched GO terms in the clusters C1 and C2 at various levels of tightness

From: Comprehensive analysis of forty yeast microarray datasets reveals a novel subset of genes (APha-RiB) consistently negatively associated with ribosome biogenesis

  GO process Back. frequency δ = 0.1   δ = 0.2   δ = 0.3   δ = 0.4   δ = 0.5  
    Freq. P-val. Freq. P-val. Freq. P-val. Freq. P-val. Freq. P-val.
C1 Ribosome biogenesis 411/7167 210/516 E-140 183/344 E-146 153/257 E-129 124/164 E-123 65/79 E-66
  Biological process unknown* 1189/6334 46/516   26/344   17/257   9/164   4/79  
C2 Response to oxidative stress 101/7167 23/394 E-6 6/47 E-3       
  Oxidation-reduction process 174/7167 33/394 E-7 3/47 >E-1       
  Biological process unknown* 1189/6334 114/394   12/47        
  1. *The enrichment of the “biological process unknown” term has been found by the GO Slim Mapper tool rather than the GO Term Finder tool. Note that the p-value is only provided by the GO Term Finder tool.