Table 11 Some functional modules predicted by MCODE using DIP data
ID | Size | Proteins in the predicted module | Real protein module | MR(%) | p-values | ||
|---|---|---|---|---|---|---|---|
| Â | Â | Â | Â | Â | Biological | Cellular | Molecular |
1 | 5 | yhr012w yjl053w yjl154c yor069w yor132w | Retromer module | 100 | 3.13e-09 | 5.58e-13 | 4.67e-08 |
2 | 10 | ybl084c ydl008w ydr118w yfr036w ygl240w yhr166c | Anaphase-promoting | 100 | 5.62e-24 | 8.52e-23 | 1.29e-14 |
| Â | Â | ykl022c ylr127c ynl172w yor249c | Â | Â | Â | Â | Â |
3 | 9 | ybl026w ycr077c ydr378c yer112w yer146w yjl124c | Ribonucleo protein | 100 | 1.25e-07 | 9.18e-14 | 1.16e-05 |
| Â | Â | yjr022w ylr438c ynl147w | Â | Â | Â | Â | Â |
4 | 8 | ydl232w yel002c ygl022w ygl226c yjl002c ymr149w | Oligosaccharyl transferase | 87.5 | 9.37e-15 | 8.19e-19 | 2.51e-12 |
| Â | Â | yor085w yor103c | Â | Â | Â | Â | Â |
5 | 7 | ycr002c ydl225w ydr507c yhr107c yjr076c ylr314c | Septin module | 71.4 | 8.31e-12 | 1.36e-13 | 2.49e-08 |
| Â | Â | ynl166c | Â | Â | Â | Â | Â |
6 | 6 | ygr200c yhr187w ylr384c ymr312w ypl086c ypl101w | Elongator holoenzyme | 100 | 7.17e-11 | 3.11e-16 | 6.61e-05 |
7 | 6 | ydr211w ygr083c yjr007w ykr026c ylr291c | Interacting eIF2 (Sui2/3/4) | 100 | 3.14e-10 | 7.03e-13 | 3.82e-11 |
| Â | Â | yor260w | and eIF2B (Gcd1/2/6/7/Gcn3) | Â | Â | Â | Â |
8 | 6 | ybr087w yhr191c yjr068w ymr078c ynl290w yol094c | Ctf18 RFC-like module | 100 | 8.60e-10 | 2.59e-15 | 1.70e-08 |
9 | 6 | q0085 ybl099w ydr377w yjr121w ykl016c | Mitochondrial proton-transporting | 83.3 | 4.59e-10 | 4.59e-10 | 4.59e-10 |
| Â | Â | yml081c | ATP synthase | Â | Â | Â | Â |
10 | 6 | ybr079c ydr429c ylr192c ynl244c yor361c ypr041w | eIF1/eIF3/eIF5 module | 100 | 2.39e-07 | 2.56e-10 | 5.52e-11 |