Table 1 Reference genome codes, strains and locus tag prefixes used for searching PubMed Central
From: Mining locus tags in PubMed Central to improve microbial gene annotation
Code | Strain | Tag prefix | RefSeq acc |
|---|---|---|---|
BPS | Burkholderia pseudomallei K96243 | BPSL, BPSS | NC_006350, NC_006351 |
Cj | Campylobacter jejuni subsp. jejuni NCTC 11168 | Cj | NC_002163 |
CT | Chlamydia trachomatis D/UW-3/CX | CT | NC_000117 |
FTT | Francisella tularensis subsp. tularensis SCHU S4 | FTT | NC_006570 |
HP | Helicobacter pylori 26695 | HP | NC_000915 |
lmo | Listeria monocytogenes EGD-e | lmo | NC_003210 |
Rv | Mycobacterium tuberculosis H37Rv | Rv | NC_000962 |
PA | Pseudomonas aeruginosa PAO1 | PA | NC_002516 |
VC | Vibrio cholerae O1 biovar El Tor str. N16961 | VC, VCA | NC_002505, NC_002506 |
YPO | Yersinia pestis CO92 | YPO | NC_003143 |