Table 3 Runtime comparison of RNAEAPATH and HIPATH2
From: Analysing RNA-kinetics based on folding space abstraction
Instance | RNAEAPATH | HIPATH2 |
|---|---|---|
rb1 | 38m 49s | 8m 59s |
rb2 | 10m 31s | 5m 20s |
rb3 | 25m 45s | 11m 22s |
rb4 | 0m 02s | 5m 33s |
rb5 | 14m 31s | 14m 20s |
hok | 443m 51s | 45m 13s |
SL | 12m 49s | 1m 31s |
attenuator | 15m 56s | 1m 15s |
s15 | 11m 42s | 1m 06s |
sbox leader | 24m 47s | 19m 21s |
thiM leader | 48m 28s | 7m 41s |
ms2 | 15m 03s | 0m 25s |
HDV | 30m 57s | 9m 50s |
dsrA | 14m 51s | 2m 10s |
ribD leader | 59m 33s | 24m 20s |
amv | 15m 05s | 10m 35s |
alpha operon | 16m 50s | 4m 59s |
HIV-1 leader | 37m 54s | 18m 01s |
Total | 837m 33s | 192m 09s |