Table 3 Performance of MDDLogo-clustered SVM models evaluated by five-fold cross validation.
From: Characterization and identification of protein O-GlcNAcylation sites with substrate specificity
SVM model | Number of positive data | Number of negative data | Sn | Sp | Acc | MCC |
|---|---|---|---|---|---|---|
All data (Single SVM) | 375 | 375 | 0.68 | 0.69 | 0.69 | 0.22 |
Subgroup OG1 | 150 | 150 | 0.80 | 0.81 | 0.81 | 0.41 |
Subgroup OG2 | 92 | 92 | 0.78 | 0.79 | 0.79 | 0.37 |
Subgroup OG3 | 64 | 64 | 0.76 | 0.80 | 0.79 | 0.37 |
Subgroup OG4 | 69 | 69 | 0.70 | 0.71 | 0.71 | 0.25 |
Combined performance (MDDLogo-clustered SVMs) | 375 | 375 | 0.76 | 0.80 | 0.78 | 0.37 |