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Table 4 The comparisons of prediction accuracies (%) between SCMHBP and some methods.

From: SCMHBP: prediction and analysis of heme binding proteins using propensity scores of dipeptides

Method HBPGO-TRN1000 HBPGO-TST494 HemeBind145 TargetS311 Mean test
SCMHBP* 85.90 ± 0.42 72.79 ± 1.21 67.24 ± 2.89 74.69 ± 2.48 71.57 ± 7.83
SVM-AAC 91.00 64.57 66.21 75.56 68.78
SVM-DPC 97.70 78.54 63.45 74.60 72.20
SVM-PSSM400 91.00 87.45 66.21 74.28 75.98
SVM-AAindex 87.60 76.52 71.72 80.39 76.21
J48-AAC 93.80 66.80 65.52 67.20 66.51
J48-DPC 97.90 64.78 60.00 68.81 64.53
J48-PSSM400 97.70 75.30 61.38 62.38 66.35
J48-AAindex 98.60 68.22 62.76 70.42 67.13
Bayes-AAC 69.20 67.40 71.03 62.70 67.04
Bayes-DPC 67.40 63.77 73.79 71.38 69.65
Bayes-PSSM400 57.80 55.30 85.52 82.64 74.49
Bayes-AAindex 63.60 63.20 61.38 55.95 60.18
Mean accuracy 84.55 69.63 69.02 72.00 70.22
  1. * The results are the averages of the performances with 10 difference score cards from 10 independent runs.