Table 1 Amino acid composition and linker index.
From: Protein inter-domain linker prediction using Random Forest and amino acid physiochemical properties
Amino acid | Linker (%) | Domain (%) | Linker index |
|---|---|---|---|
P | 7.95 | 4.93 | -0.478 |
S | 8.32 | 6.97 | -0.177 |
T | 6.68 | 5.67 | -0.163 |
E | 7.53 | 6.62 | -0.128 |
K | 6.30 | 5.64 | -0.112 |
Q | 4.35 | 4.04 | -0.073 |
A | 7.03 | 6.64 | -0.058 |
V | 7.33 | 6.96 | -0.052 |
R | 5.39 | 5.39 | 0.000 |
D | 5.39 | 5.47 | 0.016 |
N | 4.29 | 4.41 | 0.027 |
I | 4.86 | 5.16 | 0.060 |
L | 7.62 | 8.75 | 0.138 |
H | 2.13 | 2.59 | 0.195 |
F | 2.92 | 3.71 | 0.240 |
M | 1.47 | 1.94 | 0.275 |
Y | 2.49 | 3.44 | 0.322 |
G | 5.46 | 7.60 | 0.331 |
C | 1.62 | 2.53 | 0.447 |
W | 0.89 | 1.56 | 0.564 |