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Table 2 DNA-based Relapse key genes

From: Enhancing cancer clonality analysis with integrative genomics

Gene DNA Mutation AA Change CN DP AF RNA Mutation Notes
DNA2 Same same 3 70 38 N  
MYC Same same 3 257 33 Y  
SETD2 Same same 2 105 35 Y  
TET2 Same same 3 129 36 N  
TNFRSF11A Same same 3 283 15 N  
KRAS c.183A>C p.Gln61His 3 175 4 N Oncogene
MTOR c.6016G>C p.Val2006Leu 1 69 23 Y Oncogene
MLL3 c.944G>A p.Gly315Asp 1 392 4 N HMT
  1. A tabular version of the clonal dynamics showed in Figure 3A lists changes in allelic frequency, depth and copy number for the Relapse sample.