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Figure 2 | BMC Bioinformatics

Figure 2

From: Exact approaches for scaffolding

Figure 2

Setup of the dynamic programming on tree decompositions. A vertex u X(i) can have degree d(u) = 0 (white circle), d(u) = 1 (black circle), or d(u) = 2 (gray circle) in G i S . Vertices with d(u) = 1 are always incident with paths in G i S (gray ellipse), forming a pairing (a permutation) P on them.

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