Methods | TP | FN | TN | FP | Sn | Sp | Acc | MCC |
---|---|---|---|---|---|---|---|---|
Single HMM with all data | 609 | 347 | 40072 | 20904 | 63.70% | 65.72% | 65.69% | 0.076 |
MDD-clustered HMMs (7 OGT HMMs) | 833 | 123 | 45212 | 15764 | 87.13% | 74.15% | 74.38% | 0.171 |
Two-layered model (7 HMMs + 1 SVM) | 828 | 128 | 51224 | 9752 | 86.61% | 84.01% | 84.05% | 0.231 |
YinOYang | 449 | 507 | 50619 | 10357 | 46.97% | 83.01% | 82.46% | 0.097 |
O-GlcNAcScan | 411 | 545 | 51219 | 9757 | 42.99% | 84.00% | 83.37% | 0.089 |
O-GlcNAcPRED | 554 | 402 | 38414 | 22562 | 57.95% | 63.00% | 62.92% | 0.053 |