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Table 1 Characteristics of ancestral genes and adjacencies from observed ancestral adjacencies filtered by Boltzmann probability (leftmost column), with different kT values.

From: Evolution of genes neighborhood within reconciled phylogenies: an ensemble approach

  Ancestral genes Ancestral adjacencies Syntenic conflicts
Proba. kT= 0.5 kT= 0.1 kT= 0.01 kT= 0.5 kT= 0.1 kT= 0.01 kT= 0.5 kT= 0.1 kT= 0.01
≥ 0.1 122,593 120,495 120,531 137,133 116,671 116,873 31,415 14,655 14,863
≥ 0.2 121,896 119,792 119,864 130,928 113,835 114,109 26,415 12,631 12,871
≥ 0.3 120,869 118,871 118,913 122,073 110,472 110,676 19,729 10,259 10,471
≥ 0.4 118,240 117,883 117,990 111,224 107,492 107,845 11,569 8,439 8,738
≥ 0.5 113,023 116,476 116,810 100,265 103,963 105,015 5,658 6,578 7,373
≥ 0.6 104,970 114,699 114,902 88,943 100,064 100,511 3,044 5,081 5,387
≥ 0.7 92,647 112,834 112,924 75,063 96,546 96,789 1,363 4,104 4,301
≥ 0.8 75,408 110,272 110,503 58,665 92,181 92,621 492 3,290 3,496
≥ 0.9 45,753 107,769 107,863 34,005 88,132 88,373 65 2,717 2,886
= 1 13 16,470 106,903 7 10,798 87,048 0 0 2,690