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Table 3 Performance comparison of the algorithms for predicting modules of size ≥ 20 on S. cerevisiae-2 PIN; μ = 0.5

From: The relative vertex clustering value - a new criterion for the fast discovery of functional modules in protein interaction networks

Algorithms

Number of modules

Percentage of significant modules

Mean(-log P-value)

Mean(F-Measure)

FAC-PIN

58

98.28%

8.21

0.42

HC-PIN (λ = 1)

45

97.11%

12.25

0.31

CNM

17

96.43%

13.53

0.05