Table 1 Simulated datasets of low abundance (read length is 1 kbp on average).
From: Exploiting topic modeling to boost metagenomic reads binning
Dataset | Reads number | Species number | Abundance ratio |
|---|---|---|---|
D1 | 5k | 2 | 1:1 |
D2 | 5k | 2 | 1:2 |
D3 | 5k | 2 | 1:4 |
D4 | 5k | 2 | 1:6 |
D5 | 5k | 2 | 1:8 |
D6 | 5k | 2 | 1:10 |
D7 | 5k | 2 | 1:12 |
D8 | 5k | 3 | 1:1:1 |
D9 | 5k | 3 | 1:3:9 |
D10 | 5k | 4 | 1:3:3:9 |
D11 | 5k | 5 | 1:1:1:1:1 |
D12 | 5k | 5 | 1:1:3:3:9 |
D13 | 5k | 10 | 1:1:1:1:1:1:1:1:1:1 |
D14 | 50k | 3 | 1:3:9 |
D15 | 50k | 4 | 1:3:3:9 |
D16 | 50k | 5 | 1:1:3:3:9 |