Table 2 Simulated datasets of relatively-high abundance (read length is 1 kbp on average).
From: Exploiting topic modeling to boost metagenomic reads binning
Dataset | Reads number | Species number | Abundance ratio |
|---|---|---|---|
S1 | 50k | 2 | 1:1 |
S2 | 50k | 3 | 1:1:1 |
S3 | 50k | 3 | 1:3:9 |
S4 | 50k | 5 | 1:1:3:3:9 |
S5 | 50k | 10 | 1:1:1:1:1:1:1:1:1:1 |
S6 | 500k | 2 | 1:1 |
S7 | 500k | 3 | 1:1:1 |
S8 | 500k | 3 | 1:3:9 |
S9 | 500k | 5 | 1:1:3:3:9 |
S10 | 500k | 10 | 1:1:1:1:1:1:1:1:1:1 |