Table 4 Results of experiments on Tianhe-2 using 5 different settings.
From: MICA: A fast short-read aligner that takes full advantage of Many Integrated Core Architecture (MIC)
Setting | MIC card used | Output Format | Finished lane | Longest (sec) | Mean (sec) | Median (sec) |
|---|---|---|---|---|---|---|
1 | 3 | SAM | 923 | 3,425 | 1,303 | 1,220 |
2 | 3 | BAM | 929 | 6,012 | 2,777 | 2,666 |
3 | 3 | 6-thread BAM | 928 | 4,484 | 1,371 | 1,321 |
4 | 2 | 6-thread BAM | 931 | 4,269 | 1,508 | 1,475 |
5 | 1 | 6-thread BAM | 930 | 6,915 | 2,943 | 2,879 |