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Table 2 Table 2

From: A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure

Node Description Main state type
MATP (pair) P
MATL (single strand, left) L
MATR (single strand, right) R
BIF (bifurcation) B
ROOT (root) S
BEGL (begin, left) S
BEGR (begin, right) S
END (end) E