Table 1 Confidence scores for cofactors domains. The best templates were used to build the theoretical model. In FFAS, all the scores below -9.000 are considered to be reliable, in Pcons – above 1.5.
From: Domain analysis of the tubulin cofactor system: a model for tubulin folding and dimerization
Protein | Domain | Score | Method | Best Template | Reference |
|---|---|---|---|---|---|
Cofactor B | UBI-like | -12.600 | FFAS03 | 1J8C | [24] |
| Â | CAP-Gly | -58.000 | FFAS03 | 1LPL | [20] |
Cofactor C | Spectrin-like | 1.604 | Pcons4 | 1CUN | [66] |
| Â | RP2/CAP-like | -35.300 | FFAS03 | 1K4Z | [67] |
Cofactor D | Armadillo | 1.994 | Pcons4 | 1EJL | [68] |
| Â | Armadillo HEAT | -32.500 -32.300 | FFAS03 FFAS03 | 1QBK 1B3U | |
Cofactor E | CAP-Gly | -46.400 | FFAS03 | 1IXD | [70] |
| Â | LRR | -44.100 | FFAS03 | 1H6T | [71] |
| Â | UBI-like | -13.000 | FFAS03 | 1J8C | [24] |