Table 1 Iterative Group Analysis of gene expression during the yeast diauxic shift. Up-regulated groups.
From: Graph-based iterative Group Analysis enhances microarray interpretation
0 h | 9.5 h | 11.5 h | 13.5 h | 15.5 h | 18.5 h | 20.5 h |
|---|---|---|---|---|---|---|
|  |  | 6144 – purine base metabolism | 6099 – tricarboxylic acid cycle | 6099 – tricarboxylic acid cycle | 3773 – heat shock protein activity | 6099 – tricarboxylic acid cycle |
|  |  | 9277 – cell wall (sensu Fungi) | 3773 – heat shock protein activity | 5749 – respiratory chain complex II (sensu Eukarya) | 6099 – tricarboxylic acid cycle | 3773 – heat shock protein activity |
|  |  | 297 – spermine transporter activity | 6950 – response to stress | 6121 – oxidative phosphorylation, succinate to ubiquinone | 5977 – glycogen metabolism | 5749 – respiratory chain complex II (sensu Eukarya) |
|  |  | 15846 – polyamine transport | 297 – spermine transporter activity | 8177 – succinate dehydrogenase (ubiquinone) activity | 6950 – response to stress | 6121 – oxidative phosphorylation, succinate to ubiquinone |
|  |  |  | 4373 – glycogen (starch) synthase activity | 3773 – heat shock protein activity | 4373 – glycogen (starch) synthase activity | 8177 – succinate dehydrogenase (ubiquinone) activity |
|  |  |  | 15846 – polyamine transport | 4373 – glycogen (starch) synthase activity | 4129 – cytochrome c oxidase activity | 6537 – glutamate biosynthesis |
|  |  |  | 5353 – fructose transporter activity | 7039 – vacuolar protein catabolism | 5751 – respiratory chain complex IV (sensu Eukarya) | 6097 – glyoxylate cycle |
|  |  |  | 15578 – mannose transporter activity | 6950 – response to stress | 5749 – respiratory chain complex II (sensu Eukarya) | 5750 – respiratory chain complex III (sensu Eukarya) |
|  |  |  | 7039 – vacuolar protein catabolism | 4129 – cytochrome c oxidase activity | 6121 – oxidative phosphorylation, succinate to ubiquinone | 9060 – aerobic respiration |
|  |  |  | 8645 – hexose transport | 5751 – respiratory chain complex IV (sensu Eukarya) | 8177 – succinate dehydrogenase (ubiquinone) activity | 4129 – cytochrome c oxidase activity |
|  |  |  | 4396 – hexokinase activity | 4396 – hexokinase activity | 30162 – regulation of proteolysis and peptidolysis | 5751 – respiratory chain complex IV (sensu Eukarya) |
|  |  |  | 5215 – transporter activity | 297 – spermine transporter activity | 4364 – glutathione transferase activity | 16491 – oxidoreductase activity |
|  |  |  | 5977 – glycogen metabolism |  |  | 6101 – citrate metabolism |