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Table 2 Sequences used for testing

From: Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics

Sequence

Length

BP

Reference

PseudoBase

variable

variable

[14]

7 HIVRT

35

11

[34]

14 tRNAs

71–82

18–19

 

HDV

87

32

[32]

ag-HDV

91

25

[32]

TYMV

86

24

[35]

TMV (up)

85

25

[36]

STNV

252

69

GenBank:M64479

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BMC Bioinformatics

ISSN: 1471-2105

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