Table 6 Newly designed protein signatures/peptides for the different blue copper proteins. The number of protein sequences retrieved from the PIR nREF database for each of the newly designed signatures.
From: Functionally specified protein signatures distinctive for each of the different blue copper proteins
S. NO: | NAME OF THE PROTEIN | SIGNATURE /PEPTIDES | NO: OF RELATED PICKS | NO: OF FALSE PICKS |
|---|---|---|---|---|
1 | PLANTACYANIN | [F]-[I]-[C]-[NST]-[F]-[PG]-x-[H]-[C] | 10 | NO |
2 | PLASTOCYANIN [eukaryotic source] | [C]-x-[P]-[H]-x-[GS]-[A]-[GN]-[M] | 80 | 1 |
3 | PLASTOCYANIN [prokaryotic source] | [Y]-[C]-x-[P]-[H]-[R]-[G]-[A]-[G]-[M]-[V]-[G] | 21 | NO |
4 | PLASTOCYANIN [prokaryotic source] | PHRGAGMVG | 21 | NO |
5 | STELLACYANIN | [H]-[C]-x-[NL]-[G]-[MQ]-[K]-[LV]-x-[VI]-[NRQ]-[V] | 7 | 1 |
6 | UCLACYANIN | [P]-[G]-x-[R]-[Y]-[F]-[I]-[C]-[G] | 3 | NO |
7 | UCLACYANIN | RYFICG | 11 | NO |
8 | RUSTICYANIN | [G]-[M]-[YF]-[G]-[K]-[I]-[V]-[V] | 8 | NO |
9 | SULFOCYANIN | [C]-[G]-[I]-[AL]-[G]-[H]-[A]-[VAQ]-[SA]-[G]-[M]-[W] | 5 | 1 |
10 | SULFOCYANIN | FNFNGTS | 5 | 1 |
11 | AMICYANIN | [AP]-[G]-[SAT]-[FVY]-[D]-[YF]-[FHIY]-[C]-[RT]-x-[H]-[P] | 10 | 1 |
12 | HALOCYANIN | [C]-[TN]-[P]-[H]-x-[AT]-x-[G]-[M]-x-[G]-[A] | 2 | NO |
13 | PSEUDOAZURIN | [K]-[C]-[TA]-[P]-[H]-x-[GAM]-[M]-[GS]-[M] | 18 | NO |
14 | AZURIN | [D]-x-[R]-[V]-[LI]-[A]-[HYF]-[T]-x-[VIL]-[VIL]-[G]-[GAS]-[G] | 54 | NO |
15 | NITRITE REDUCTASE | [P]-[ST]-[HY]-[VIGA]-[VL]-[FM]-[N]-[G] | 235 | NO |