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Table 1 Correspondence of external biological keywords and ProtoNet clusters.

From: A functional hierarchical organization of the protein sequence space

External Source ProtoNet Mean Best CSa Random Mean Best CS (std dev) # KW
InterPro 0.835 0.026 (0.9*10-4) 2034
GO molecular function 0.588 0.024 (0.8*10-4) 1220
SCOP family 0.720 0.299 (0.8*10-4) 742
SCOP superfamily 0.654 0.260 (0.9*10-4) 558
SCOP fold 0.598 0.230 (1*10-4) 408
ENZYME entry 0.848 0.179 (0.7*10-4) 1432
ENZYME sub-subclass 0.517 0.053 (2*10-4) 161
ENZYME subclass 0.412 0.025 (4*10-4) 56
  1. aCS – correspondence score, see text for definition.