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Table 2 Gene prediction performance Performance figures for SNAP are derived from 5-fold cross-validation. At Arabidopsis thaliana, Ce Caenorhabditis elegans, Dm Drosophila melanogaster, Os Oryza sativa. SN and SP correspond to sensitivity and specificity.

From: Gene finding in novel genomes

   Nucleotide Exon Gene
Genome Gene finder SN SP SN SP SN SP
At SNAP 97.1 95.2 82.9 81.2 54.3 46.8
  Genscan 79.9 92.9 65.3 71.2 19.5 21.3
Ce SNAP 97.6 94.2 85.5 79.3 46.0 32.5
  Genefinder 98.1 95.3 89.2 86.1 51.6 48.0
  Genscan 81.3 91.6 48.6 66.4 10.2 9.6
  HMMGene 84.1 97.0 58.9 71.7 20.9 19.6
Dm SNAP 94.3 86.5 78.6 67.2 50.8 37.5
  Augustus 92.4 88.6 77.2 68.2 50.7 31.9
  Genscan 84.5 81.1 68.7 62.9 22.1 20.0
Os SNAP 86.2 94.0 70.2 72.4 51.2 37.0
  Genscan 70.3 89.8 58.2 74.8 25.9 32.0