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Table 2 Substitution rates derived from concatenated alignments. Results derived from concatenated alignments from the same datasets as in Table 1 are shown. Sampling error, in parentheses, was estimated using the bootstrap method described in the Implementation section.

From: FRAGS: estimation of coding sequence substitution rates from fragmentary data

Data Set Codons Codon identity K a K s K a /K s
BES (quality filtered) 19490 0.959 0.012 (0.001) 0.033 (0.002) 0.374 (0.04)
BES (unfiltered) 45702 0.935 0.022 (0.001) 0.046 (0.002) 0.491 (0.02)
Genbank CDSs 26019 0.966 0.009 (0.001) 0.020 (0.001) 0.473 (0.05)
Genbank ESTs 125198 0.958 0.006 (0.0003) 0.026 (0.001) 0.235 (0.01)