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Table 4 Comparison of two microarray data sets at gene set level

From: PAGE: Parametric Analysis of Gene Set Enrichment

  GDS 287 GDS 472
Gene Set Z score p-value Z score p-value
mRNA processing 4.0322 0.0001 3.2288 0.0012
cell cycle 3.0715 0.0021 3.1127 0.0019
mRNA catabolism 2.2233 0.0262 2.9762 0.0029
mRNA splicing 5.9613 3.00E-09 2.8041 0.0050
nuclear mRNA splicing_via spliceosome 6.3123 2.75E-10 2.6642 0.0077
regulation of cyclin dependent protein kinase activity 2.1343 0.0328 2.5703 0.0102
G1 phase of mitotic cell cycle 2.5482 0.0108 2.5361 0.0112
negative regulation of cell proliferation 3.0116 0.0026 2.0812 0.0374
cholesterol metabolism 2.2758 0.0229 2.0312 0.0422
blood coagulation -2.6705 0.0076 -2.0119 0.0442
protein folding -2.1739 0.0297 -2.1045 0.0353
regulation of blood pressure -3.0984 0.0019 -2.3543 0.0186
carboxylic acid transport -2.9366 0.0033 -2.8088 0.0050
signal transduction -2.5917 0.0095 -3.0115 0.0026
glycolysis -4.0631 4.84E-05 -5.3157 1.06E-07
tricarboxylic acid cycle -2.2914 0.0219 -6.3019 2.94E-10
electron transport -3.9150 0.0001 -6.9442 3.81E-12