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Table 1 Clusters Of Categories Derived From The CIM (Figure 3)

From: High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID)

Cluster Number Cluster Name Category
1 Exogenous Antigen antigen presentation exogenous antigen
   antigen processing exogenous antigen via MHC class II
2 Xenobiotic xenobiotic metabolism
   response to xenobiotic stimulus
3a Signaling cell surface receptor linked signal transduction
   G-protein coupled receptor protein signaling pathway
4 Homeostasis calcium ion homostasis
   di-tri-valent inorganic cation homeostasis
   cell ion homeostasis
   cation homeostasis
   metal ion homeostasis
   ion homeostasis
5a Response response to chemical substance
   response to abiotic stimulus
3b Signaling cell-cell signaling
6 Taxis taxis
   chemotaxis
5b Response cellular defense response
5c Response response to stimulus
   response to external stimulus
   organismal physiological process
   immune response
   response to biotic stimulus
   defense response
5d Response response to wounding
5e Response response to pest pathogen parasite
   response to stress
7 Adhesion cell adhesion
5f Response humoral immune response
   humoral defense mechansim