Skip to main content

Table 2 Names and Consensus Sequences for Transcription Factors that Co-Regulate the Changed Genes in the GO Category 'G-protein Coupled Receptor Protein Signaling Pathway' and a Large Core of 'Response' Categories (Figure 4 and Supplementary Materials [see Additional file 8])

From: High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID)

Name Consensus
AP-1-IL-3 TGAGTCA
AP-1-involucrin-H2 TGCCTCA
ASP-CYP21 CTCTGTGG
AlphaCE2Maf-Bfsp1 TGCTGAC
B2_RS TCCTATCA
CP2-consensus GCNMNANCMAG
CPSI-B1 TCTCCCA
EBF/Olf-1_site_2 TCCCNNRRGRR
EBV-ZRE2 TGAGCAA
FHX-type-A-CS WMARYAAAYA
GAGA_box/CT_element AGAGARRRR
GH-CSE2 AATAAAT
GRE_CS7 WCTGWTCT
GRE_CS8 AGAWCAGW
GT-2B_RS CCAGCTG
GT-IIBa-SV40 ACAGCTG
HNF5-erk1 TATTTGT
HiNF-Ahist AGAAATG
IL4-P0/P1 ATTTTCC
Initiator_CS CTCANTCT
MEF-2-consensus YTWWAAATAR
MEF-2_CS YTAWAAATAR
NF-Y-consensus BVDCCAATVVVVD
PuF_RS GGGTGGG
RadLV-core TGTGGTCA
Runx_CS AACCACA
Six5_CS TCARRTTNC
Sp1-VGF_1 AGGGAGG
TCF-2-alpha_CS SAGGAAGY
TCR-beta-site-6 AATACAA
TRE.1 TGACTCA
c-Myc_RS1 TCTCTTA
c-mos_DS3 GTTTTAA
delta-rpL7 GGAGGCTG
forkhead_CS WAARYAAAYW
p300-consensus GGGAGTG