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Table 2 Sample set of genes and resulting primer pairs using MPrime1.0. The top sequence in each primer pair is the forward primer, the second sequence is the reverse primer.

From: MPrime: efficient large scale multiple primer and oligonucleotide design for customized gene microarrays

Gene Name

Product Size

Primer Pairs

GAPDH

400

AATGTGTCCGTCGTGGATCT

GGGTCTGGGATGGAAATTGT

Actb

400

GGCGCTTTTGACTCAGGATT

AGTTGGGGGGACAAAAAAAA

Sdf4

400

AGACCTGCCAACCACTCATC

TGCTTGCCAAAAACTTCACT

Ubb

400

TTCTGTGAGGGTGTGAGGGT

TTTATCCTGGATCTTGGCCT

Ywhaz

400

ACAATGTTCTTGGCCCATGT

AGGAAGAGGAGGAGGAAGGA

Hprt

400

TTATGCCGAGGATTTGGAAA

AACCTTAACCATTTTGGGGC

Tubd1

400

TAAGATGCTGGGTGTCCGTA

TAAGAGCTGGCTGTTGCTGA

Tuba1

400

GACCCTCGCCATGGTAAATA

AATCCACACCAACCTCCTCA

Ppicap

400

ACTCCCTCCCTCTTTCCCTG

CAGCAGAGAAAAGCTCCACC

Hspca

400

AGGAAACCCAGACCCAAGAC

ACACCAAACTGGCCAATCAT

Htf9c

400

TGTGAATTCCTGGTCGGAGT

TCTTTCTCTGTCCCTCCTCC