Table 2 A brief summary of the sequence data underlying the emerencia web service at http://emerencia.math.chalmers.se as of May 2005. The threshold BLAST E-values for "good" and "poor" matches were arbitrarily set to 0.0 and 1e-100, respectively. Graphical illustrations showing the population of the database over time and additional aspects of emerencia are generated automatically on a monthly basis and are available at the above address.
NUMBER OF INSUFFICIENTLY IDENTIFIED SEQUENCES | 7528 (21 % of total) |
|---|---|
NUMBER OF IDENTIFIED SEQUENCES | 28959 (79% of total) |
NUMBER OF INSUFFICIENTLY IDENTIFIED SEQUENCES WITH GOOD MATCHES (E-VALUE = 0.0) | 4791 (64 % of the insufficiently identified sequences) |
NUMBER OF INSUFFICIENTLY IDENTIFIED SEQUENCES WITH POOR MATCHES (E-VALUE >1E-100) | 1135 (15 % of the insufficiently identified sequences) |
TOTAL NUMBER OF SEQUENCES LAST UPDATED BEFORE 1995-01-01 | 180 (0.5%) |
TOTAL NUMBER OF SEQUENCES LAST UPDATED BEFORE 2000-01-01 | 3651 (10 %) |
TOTAL NUMBER OF SEQUENCES LAST UPDATED BEFORE 2005-01-01 | 31858 (87%) |
NUMBER OF INSUFFICIENTLY IDENTIFIED SEQUENCES LAST UPDATED BEFORE 2000-01-01 | 264 (3.5 % of the insufficiently identified sequences) |
NUMBER OF INSUFFICIENTLY IDENTIFIED SEQUENCES LAST UPDATED BEFORE 2000-01-01 AND WITH POOR MATCHES (E-VALUE > 1E-100) | 17 (0.2 % of the insufficiently identified sequences) |
NUMBER OF IDENTIFIED SEQUENCES HAVING AT LEAST ONE INSUFFICIENTLY IDENTIFIED COUNTERPART AS IDENTIFIED BY BLAST | 2981 (10 % of the identified sequences) |
NUMBER OF IDENTIFIED SEQUENCES WITHOUT INSUFFICIENTLY IDENTIFIED COUNTERPARTS | 25978 (90 % of the identified sequences) |