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Figure 4 | BMC Bioinformatics

Figure 4

From: JACOP: A simple and robust method for the automated classification of protein sequences with modular architecture

Figure 4

Classification of 69 SH2-containing protein sequences that represent various domain architectures. a: domain architecture as predicted by the Pfam HMMs; b: partitioning obtained by JACOP; c: Swiss-Prot IDs; d: the bitscore matrix with a colour code based on heat colours ranging from white for high values to red for low values, plus black for all bitscores that are below 27; e: the tree obtained by hierarchical clustering of the proteins based on Jaccard distances.

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