Figure 6
From: Measuring similarities between transcription factor binding sites
Mapping of CLOCK-BMAL1 matrices: (a) CLOCK-BMAL1 matrices based on experimentally characterised binding sites of clock genes and from a SELEX study (see Tab. S3 of the supplementary material for the list of these binding sites). (b) Mapping of CLOCK-BMAL1 matrices on E-box matrices. These matrices have been selected from the Transfac database and include MYC, MAX, ARNT, MYOD, USF, TAL1/E47 (see [35] for a review on E-box transcription factors). An edge is drawn when D ≤ 1 and C ≥ 0.8.