Figure 2From: Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling dataFDR agreement between methods. The ratio of the number of probe sets with FDR0 value below a given threshold in k or more of the seven methods to the number of probe sets with FDR0 value below the threshold in at least one method was calculated for k = 3, 4, 5, 6, 7, and plotted against the FDR0 threshold. Results are shown for the colon data (left column), the ovary data (right column), and for the t-test statistic (top row), and the rank-sum statistic (bottom row).Back to article page