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Table 1 Comparing CPP method with nonparametric eB method in estimation of the unconditional mean E(D t ). The theoretical unconditional mean at t was calculated based on the compound Poisson process model, i.e. E(D t ) = Nq t where q t was calculated based on the CPP model. The entries in the row of CPP or SR are the Mean and root of Mean Squared Error(rMSE) (in parentheses) based on 200 Monte Carlo samples. A -(-) indicates that the mean or rMSE was not calculated because of extremely large or negative estimates from the SR method. For (I), N q1 and S were 5000, 0.36 and 3000; for (II), 10000, 0.375, 6000, and for (III) 10000, 0.221, 5000 respectively.

From: Gene capture prediction and overlap estimation in EST sequencing from one or multiple libraries

 

t

0.5

1

1.5

2

(I)

E(D t )

497

873

1168

1406

 

CPP

500(16.4)

873(35.6)

1160(58.8)

1386(85.8)

 

SR

501(17.3)

877(43)

-(-)

-(-)

(II)

E(D t )

988

1707

2253

2682

 

CPP

985(21.4)

1697(48.8)

2230(83.7)

2639(125.6)

 

SR

985(22.1)

1698(58.4)

2218(183.3)

-(-)

(III)

E(D t ]

464

801

1062

1273

 

CPP

462(15.9)

793(36.5)

1045(62.5)

1242(93.5)

 

SR

463(16.7)

799(45.2)

-(-)

-(-)