Skip to main content

Table 2 Number of expressed genes in four cDNA libraries of Arabidopsis thaliana. This table lists the gene cluster profile data (nj), EST sample size(EST.total), observed gene number (Gene.obsvd), estimated total number of expressed genes (Gene.estd) and 95% confidence interval (95% C.I.) for 4 EST sets including Silique, ABGR, Root, Flower bud; and 2 pooled sets including ABGR + Root (A+R), Silique + Flower bud (S+F).

From: Gene capture prediction and overlap estimation in EST sequencing from one or multiple libraries

n j Silique ABGR Root Flower bud A+R S+F
n 1 2963 1969 2187 1801 3333 3749
n 2 994 459 490 367 951 1270
n 3 440 182 133 140 312 566
n 4 222 69 121 69 211 295
n 5 124 58 37 40 122 182
n 6 73 28 51 25 66 109
n 7 59 17 22 22 40 80
n 8 42 20 19 10 35 49
n 9 27 7 7 15 29 48
n 10 19 19 8 12 25 33
n 11 + MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciGacaGaaeqabaqabeGadaaakeaacqWGUbGBdaqhaaWcbaGaeGymaeJaeGymaedabaGaey4kaScaaaaa@3102@ 130 55 51 63 119 214
EST.total 12330 5812 5891 5503 11529 17784
Gene.obsvd 5093 2883 3126 2564 5243 6595
Gene.estd 12005 9492 9155 9232 12720 15333
95% C.I. (11137,15300) (7823,11585) (8160,11444) (7780,11381) (11987,15579) (13202,17400)