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Table 6 The correlation between percent composition of residues and gene expression level on alternate dataset 1 (untreated) and 2 (treated). The residues in reference dataset having positive correlation are shown by underline and negative correlation by bold letter.

From: Correlation and prediction of gene expression level from amino acid and dipeptide composition of its protein

Amino Acid

Alternate Dataset 1 (Untreated)

Alternate Dataset 2 (Treated)

 

All Genes

> 100 residues

All Genes

> 100 residues

A

0.341

0.348

0.331

0.338

C

-0.052

-0.062

-0.045

-0.051

D

-0.084

-0.083

-0.055

-0.057

E

0.004

0.016

-0.012

-0.004

F

-0.072

-0.069

-0.057

-0.052

G

0.156

0.165

0.173

0.184

H

-0.075

-0.059

-0.064

-0.051

I

-0.075

-0.085

-0.060

-0.071

K

0.070

0.062

0.017

0.007

L

-0.157

-0.155

-0.137

-0.131

M

-0.046

-0.057

-0.053

-0.060

N

-0.162

-0.156

-0.159

-0.158

P

-0.026

-0.035

-0.006

-0.010

Q

-0.037

-0.049

-0.036

-0.047

R

0.018

0.022

-0.046

-0.040

S

-0.102

-0.099

-0.108

-0.109

T

0.029

0.022

0.041

0.032

V

0.178

0.188

0.193

0.209

W

-0.056

-0.064

-0.034

-0.043

Y

-0.031

-0.040

-0.002

-0.009