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Table 3 Analysis of SwissProt keywords composition in clusters calculated for the SwissProt database

From: Super paramagnetic clustering of protein sequences

K cases clusters true positive false positive false negative specificity a posteriori sensitivity a priori sensitivity
SPC
2 19161 4473 78782 4421 3373 94.7 95.9 16.1
6 79642 11643 308068 20598 261446 93.7 92.2 62.9
20 98276 6875 354980 35282 53628 91.0 86.9 72.4
64 100177 3953 331422 47215 80772 87.5 80.4 67.6
all NN 93601 3601 308433 41834 74472 88.1 80.6 62.9
TRIBE-MCL
  99636 7015 364554 36783 49333 90.8 88.1 74.4
gSPC
6 80617 9755 314537 21080 23838 93.7 93.0 64.1
20 101805 2857 388434 29379 35042 93.0 91.7 79.3
64 105248 445 400100 31061 37325 92.8 91.5 81.6
all NN 105339 19 400363 31142 37391 92.8 91.5 81.7