Figure 8
From: CLPM: A Cross-Linked Peptide Mapping Algorithm for Mass Spectrometric Analysis
Comparison of the results of uncrosslinked tryptic BSA by CLPM and MASCOT. Peptides in <red> were found by MASCOT, while peptides in () were found by CLPM. There were 34 peptides found by MASCOT and all were included in the 45 peptides found by CLPM. Settings for the searches were the same except carbamidmethylation of Cys was set as a fixed modification in MASCOT while it was a variable modification in CLPM.