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Figure 3 | BMC Bioinformatics

Figure 3

From: Utilization of two sample t-test statistics from redundant probe sets to evaluate different probe set algorithms in GeneChip studies

Figure 3

Co-occurrence rate of replicate RPSs in DEGs for GeneLogic dataset. The fraction of replicate RPSs out of all RPSs in DEG list for data from probe set algorithm RMA, MAS5.0, dChip-PM, and dChip-PM/PM is shown at individual FDR cutoffs. Comparison results for 6 dilution levels are shown separately: (a) for dilution level 1.25, (b) for dilution level 2.5, (c) for dilution level 5.0, (d) for dilution level 7.5, (e) for dilution level 10.0, and (f) for dilution level 20.0

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BMC Bioinformatics

ISSN: 1471-2105

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