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Table 1 Comparison of the prediction performance for molecular function and biological process.

From: GOPET: A tool for automated predictions of Gene Ontology terms

  Molecular function Biological process
Number of sequences used for SVM training and validation 36,771 27,109
Number of instances used in training and validation sets 856,632 1,342,270
Positive instances 31% 12%
Recall at 80% precision 65% 76%